BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D10SP1|AL428547
(456 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig977 901 0.0
3x_Contig498 214 9e-56
>3x_Contig977
Length = 3887
Score = 901 bits (454), Expect = 0.0
Identities = 455/456 (99%)
Strand = Plus / Plus
Query: 1 caatcacttgcaattccacctcaatctgaaaccccatctacaccacgtctaaccggggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3030 caatcacttgcaattccacctcaatctgaaaccccatctacaccacgtctaaccggggta 3089
Query: 61 gatgaaggagatgagtctcgcgcttcaatctctgccagttcacagaaatctactcctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3090 gatgaaggagatgagtctcgcgcttcaatctctgccagttcacagaaatctactcctgcc 3149
Query: 121 aatattcaaacttctccagaaagaacaaagttacggaatatttccgaaaatatcccatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3150 aatattcaaacttctccagaaagaacaaagttacggaatatttccgaaaatatcccatac 3209
Query: 181 atgcttcagcacgagcgcatagtagcaaggaaacaaaagcttgaagaattggaggcacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3210 atgcttcagcacgagcgcatagtagcaaggaaacaaaagcttgaagaattggaggcacaa 3269
Query: 241 tctgccaaagagttacaaaagagaattcaagaacttgaaagaaaggctattgaattgaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3270 tctgccaaagagttacaaaagagaattcaagaacttgaaagaaaggctattgaattgaag 3329
Query: 301 atgaaggaaaagctactaagacaaaactcacatagtcaatctcaagaatctatccagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3330 atgaaggaaaagctactaagacaaaactcacatagtcaatctcaagaatctatccagact 3389
Query: 361 aatacaactaaacaaaattcaacttctggaggtgcttacattaagaaagaggaaacctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3390 aatacaactaaacaaaattcaacttctggaggtgcttacattaagaaagaggaaacctat 3449
Query: 421 aacgatttagcttcgataatcagcaaaaragaatga 456
|||||||||||||||||||||||||||| |||||||
Sbjct: 3450 aacgatttagcttcgataatcagcaaaaaagaatga 3485
>3x_Contig498
Length = 2351
Score = 214 bits (108), Expect = 9e-56
Identities = 246/292 (84%)
Strand = Plus / Plus
Query: 157 aatatttccgaaaatatcccatacatgcttcagcacgagcgcatagtagcaaggaaacaa 216
|||||| || |||||| ||||||||| ||||||||||| | |||| || ||| ||||||
Sbjct: 11 aatattccccaaaataccccatacattcttcagcacgatcccatattatcaataaaacaa 70
Query: 217 aagcttgaagaattggaggcacaatctgccaaagagttacaaaagagaattcaagaactt 276
|| ||| || |||| ||||||||||| ||||| | | |||| | | ||||||| |||||
Sbjct: 71 aaccttaaataatttaaggcacaatctcccaaacactcacaatatataattcaacaactt 130
Query: 277 gaaagaaaggctattgaattgaagatgaaggaaaagctactaagacaaaactcacatagt 336
||| ||| ||||| |||| || || || |||||||||||| |||||||||||||| |
Sbjct: 131 aaaataaattctattcaattcaatattaataaaaagctactaacacaaaactcacatatt 190
Query: 337 caatctcaagaatctatccagactaatacaactaaacaaaattcaacttctggaggtgct 396
||||||||| |||||||||| |||||||||||||||||||||||||||||| || |||||
Sbjct: 191 caatctcaacaatctatccacactaatacaactaaacaaaattcaacttctagacgtgct 250
Query: 397 tacattaagaaagaggaaacctataacgatttagcttcgataatcagcaaaa 448
|||||||| ||| | ||||||||||| ||||| |||| |||||||||||||
Sbjct: 251 tacattaacaaataaaaaacctataaccatttatcttccataatcagcaaaa 302
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4165
Number of Sequences: 1807
Number of extensions: 4165
Number of successful extensions: 96
Number of sequences better than 1.0e-20: 2
length of query: 456
length of database: 10,358,551
effective HSP length: 16
effective length of query: 440
effective length of database: 10,329,639
effective search space: 4545041160
effective search space used: 4545041160
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)